高级搜索
赵小乐, 钱波, 邵泉. 肝癌中铜死亡相关基因的表达及其预后价值[J]. 肿瘤防治研究, 2023, 50(2): 140-145. DOI: 10.3971/j.issn.1000-8578.2023.22.0680
引用本文: 赵小乐, 钱波, 邵泉. 肝癌中铜死亡相关基因的表达及其预后价值[J]. 肿瘤防治研究, 2023, 50(2): 140-145. DOI: 10.3971/j.issn.1000-8578.2023.22.0680
ZHAO Xiaole, QIAN Bo, SHAO Quan. Expression and Prognostic Value of Cuprotosis-related Genes in Liver Cancer[J]. Cancer Research on Prevention and Treatment, 2023, 50(2): 140-145. DOI: 10.3971/j.issn.1000-8578.2023.22.0680
Citation: ZHAO Xiaole, QIAN Bo, SHAO Quan. Expression and Prognostic Value of Cuprotosis-related Genes in Liver Cancer[J]. Cancer Research on Prevention and Treatment, 2023, 50(2): 140-145. DOI: 10.3971/j.issn.1000-8578.2023.22.0680

肝癌中铜死亡相关基因的表达及其预后价值

Expression and Prognostic Value of Cuprotosis-related Genes in Liver Cancer

  • 摘要:
    目的 探讨铜死亡相关基因与肝癌生存预后的关系。
    方法 通过收集TCGA数据库中肝癌患者的临床信息和相应的RNA-seq数据,分析10个铜死亡相关基因在肝癌组织和正常组织中的差异表达。进一步使用一致性聚类以确定新的肝癌亚型,比较两个亚型之间总体生存率和临床特征的差异。单因素Cox回归分析筛选与预后相关的铜死亡基因,并利用LASSO回归分析构建风险模型。
    结果 与正常组织相比,肝癌组织中FDX1表现下调,其余9个基因表现上调。聚类分析示,Cluster1的预后较差。基于单因素Cox回归分析和LASSO回归分析筛选出5个预后相关基因(LIPT1、DLAT、MTF1、GLS、CDKN2A)并构建风险模型。与其他临床特征相比,该预后模型的风险评分被确认为独立的预后因素。
    结论 通过生物信息学分析构建了5个铜死亡相关基因的肝癌预后模型,有可能作为肿瘤诊断分子标志物和潜在的治疗靶点。

     

    Abstract:
    Objective To explore the relationship of cuprotosis-related genes with survival rate and prognosis in patients with liver cancer.
    Methods By collecting clinical information and corresponding RNA-seq data of patients with liver cancer in the TCGA database, the differential expression levels of 10 cuprotosis-related genes in liver cancer and normal tissues was analyzed. Novel liver cancer subtypes were identified through consistent clustering, and differences in overall survival and clinicopathological factors were compared between the two subtypes. Univariate Cox regression analysis was used in screening cuprotosis genes associated with prognosis, and LASSO regression analysis was used in constructing a risk model.
    Results FDX1 was down-regulated, and the other nine genes were up-regulated in HCC tissues compared with normal tissues. Cluster analysis showed that the prognosis of Cluster1 was poor. Five prognostic genes (LIPT1, DLAT, MTF1, GLS, and CDKN2A) were screened out through univariate Cox regression analysis and LASSO regression analysis for risk model construction. The risk score of this prognostic model was identified as an independent prognostic factor compared with other clinical features.
    Conclusion Through bioinformatics analysis, a liver cancer prognosis model of five cuprotosis-related genes is constructed, which may be used as molecular markers for tumor diagnosis and are potential therapeutic targets.

     

/

返回文章
返回