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基于TCGA数据库和实验验证分析肝细胞癌中PLCβ 4基因的表达及临床意义

杨建华

杨建华. 基于TCGA数据库和实验验证分析肝细胞癌中PLCβ 4基因的表达及临床意义[J]. 肿瘤防治研究. DOI: 10.3971/j.issn.1000-8578.20241044
引用本文: 杨建华. 基于TCGA数据库和实验验证分析肝细胞癌中PLCβ 4基因的表达及临床意义[J]. 肿瘤防治研究. DOI: 10.3971/j.issn.1000-8578.20241044
. Expression and clinical significance of PLCβ4 gene in hepatocellular carcinoma analysed based on TCGA database and experimental validation[J]. Cancer Research on Prevention and Treatment. DOI: 10.3971/j.issn.1000-8578.20241044
Citation: . Expression and clinical significance of PLCβ4 gene in hepatocellular carcinoma analysed based on TCGA database and experimental validation[J]. Cancer Research on Prevention and Treatment. DOI: 10.3971/j.issn.1000-8578.20241044

基于TCGA数据库和实验验证分析肝细胞癌中PLCβ 4基因的表达及临床意义

基金项目: (SKL-HIDCA-2023-YX)省部共建中亚高发病成因与防治国家重点实验室药学专项项目;(82360795)国家自然科学基金项目 ;(GL-A005)公立医院高质量发展科研公益项目基金

Expression and clinical significance of PLCβ4 gene in hepatocellular carcinoma analysed based on TCGA database and experimental validation

  • 摘要: 目的 基于癌症基因组图谱(TCGA)数据库分析肝细胞癌中磷酸肌醇特异性磷脂酶-C4基因mRNA的表达及其临床意义。方法 基于TCGA数据库中的424例临床样本数据资料(包括肝细胞癌组织374例,非肿瘤肝组织50例),采用Kaplan-Meier法、Cox回归分析、免疫浸润分析,评估PLC4基因与HCC患者临床特征及生存预后的关系。应用PLC4基因与24种免疫细胞的相关性分析,考察PLC4基因与免疫细胞浸润的关系、肝癌高频突变基因TP53基因mRNA表达水平的相关性。此外,收集新疆医科大学第一附属医院病理科HCC患者的高分化、中分化、低分化肿瘤组织以及正常肝组织石蜡切片,各20例,通过HE染色法进行组织病理学观察,免疫组化法对各临床样本中PLC4、Ki-67蛋白表达水平进行验证。结果 PLC4基因在HCC中的表达水平显著高于正常组织(P < 0.01),且PLC4高表达组患者的总生存期均明显长于低表达组(P < 0.05),提示PLC4显著影响HCC患者预后。相关性分析结果显示PLC4基因的表达水平与免疫细胞浸润高度相关;且PLC4与TP53基因的表达水平高度相关。经临床样本实验验证,HE染色、免疫组化结果显示,HCC组织样本中的PLC4基因表达显著高于正常组织(P<0.05),且与分化程度呈负相关关系。结论 PLC4可作为肝细胞癌的一个独立预后因素,有望成为HCC治疗的新型分子靶点。

     

    Abstract: Objective Analysis of acid inositol-specific phospholipase-4gene mRNA expression and its clinical significance in hepatocellular carcinoma based on The Cancer Genome Atlas (TCGA) database.Methods Based on the data information of 424 clinical samples (including 374 cases of hepatocellular carcinoma tissues and 50 cases of non-tumour liver tissues) in the TCGA database, Kaplan-Meier method, Cox regression analysis, and immune infiltration analysis were used to evaluate the relationship between PLC4 gene and the clinical characteristics and survival prognosis of HCC patients. Correlation analysis between PLC4 gene and 24 types of immune cells was applied to investigate the relationship between PLC4gene and immune cell infiltration, and the correlation between the mRNA expression level of TP53 gene, a high-frequency mutation gene in hepatocellular carcinoma. In addition, paraffin sections of highly differentiated, moderately differentiated, and poorly differentiated tumour tissues as well as normal liver tissues from HCC patients in the Department of Pathology of the First Affiliated Hospital of Xinjiang Medical University were collected, each of which was 20 cases, and the histopathological observation was carried out by HE staining method, and the expression levels of PLC4 and Ki-67 proteins were verified by immunohistochemistry method in each clinical sample. Results The expression level of PLC4 gene in HCC was significantly higher than that in normal tissues (P < 0.01), and the overall survival of all patients in the PLC4 high-expression group was significantly longer than that in the low-expression group (P<0.05), suggesting that PLC4 significantly affects the prognosis of HCC patients. Correlation analysis showed that the expression level of PLC4 gene was highly correlated with immune cell infiltration; and PLC4 was highly correlated with the expression level of TP53 gene. As verified by clinical sample experiments, the results of HE staining experiments showed that immunohistochemistry results showed that PLC4 gene expression in HCC tissue samples was significantly higher than that in normal tissues (P<0.05), and it was positively correlated with the degree of differentiation.Conclusion PLC4 may serve as an independent prognostic factor in hepatocellular carcinoma and is expected to be a novel molecular target for HCC treatment.

     

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出版历程
  • 收稿日期:  2024-10-24
  • 修回日期:  2025-04-13
  • 录用日期:  2025-04-14
  • 网络出版日期:  2025-04-14

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